Onchocerca volvulus: 2914 contigs; 299336 codons AMINO ACID FREQUENCIES ====================== A Ala 17813 5.95 % C Cys 6689 2.23 % D Asp 15056 5.02 % E Glu 18333 6.12 % F Phe 14714 4.91 % G Gly 16849 5.62 % H His 7427 2.48 % * stop 355 0.11 % I Ile 20692 6.91 % K Lys 21167 7.07 % L Leu 26576 8.87 % M Met 7990 2.66 % N Asn 14572 4.86 % P Pro 13464 4.49 % Q Gln 11797 3.94 % R Arg 17634 5.89 % S Ser 21762 7.27 % T Thr 15488 5.17 % V Val 17037 5.69 % W Typ 3584 1.19 % Y Tyr 10337 3.45 % CODON USAGE FREQUENCIES ======================= A Ala GCA 6679 2.23 % A Ala GCC 2458 0.82 % A Ala GCG 2549 0.85 % A Ala GCT 6127 2.04 % C Cys TGT 4014 1.34 % C Cys TGC 2675 0.89 % D Asp GAC 3109 1.03 % D Asp GAT 11947 3.99 % E Glu GAA 14134 4.72 % E Glu GAG 4199 1.4 % F Phe TTC 5427 1.81 % F Phe TTT 9287 3.1 % G Gly GGA 5905 1.97 % G Gly GGC 2901 0.96 % G Gly GGG 1542 0.51 % G Gly GGT 6501 2.17 % H His CAC 1869 0.62 % H His CAT 5558 1.85 % * stop TAA 190 0.06 % * stop TAG 86 0.02 % * stop TGA 79 0.02 % I Ile ATA 5693 1.9 % I Ile ATC 5119 1.71 % I Ile ATT 9880 3.3 % K Lys AAA 14712 4.91 % K Lys AAG 6455 2.15 % L Leu CTA 2521 0.84 % L Leu CTC 2016 0.67 % L Leu CTG 3660 1.22 % L Leu CTT 5216 1.74 % L Leu TTA 6543 2.18 % L Leu TTG 6620 2.21 % M Met ATG 7990 2.66 % N Asn AAC 3655 1.22 % N Asn AAT 10917 3.64 % P Pro CCA 5951 1.98 % P Pro CCC 1307 0.43 % P Pro CCG 3079 1.02 % P Pro CCT 3127 1.04 % Q Gln CAA 7407 2.47 % Q Gln CAG 4390 1.46 % R Arg AGA 3730 1.24 % R Arg CGA 4475 1.49 % R Arg AGG 1670 0.55 % R Arg CGC 1841 0.61 % R Arg CGG 1544 0.51 % R Arg CGT 4374 1.46 % S Ser AGC 2409 0.8 % S Ser TCA 6019 2.01 % S Ser TCC 2321 0.77 % S Ser AGT 4162 1.39 % S Ser TCG 3041 1.01 % S Ser TCT 3810 1.27 % T Thr ACA 5900 1.97 % T Thr ACC 2418 0.8 % T Thr ACG 2695 0.9 % T Thr ACT 4475 1.49 % V Val GTA 4480 1.49 % V Val GTC 2452 0.81 % V Val GTG 3681 1.22 % V Val GTT 6424 2.14 % W Typ TGG 3584 1.19 % Y Tyr TAC 2937 0.98 % Y Tyr TAT 7400 2.47 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).