Pristionchus pacificus: 2597 contigs; 297605 codons AMINO ACID FREQUENCIES ====================== A Ala 22118 7.43 % C Cys 5789 1.94 % D Asp 16048 5.39 % E Glu 20537 6.9 % F Phe 12020 4.03 % G Gly 19759 6.63 % H His 7363 2.47 % * stop 59 0.01 % I Ile 15856 5.32 % K Lys 19693 6.61 % L Leu 25061 8.42 % M Met 7598 2.55 % N Asn 11638 3.91 % P Pro 15120 5.08 % Q Gln 10116 3.39 % R Arg 19008 6.38 % S Ser 22591 7.59 % T Thr 15952 5.36 % V Val 18939 6.36 % W Typ 3498 1.17 % Y Tyr 8842 2.97 % CODON USAGE FREQUENCIES ======================= A Ala GCA 4587 1.54 % A Ala GCC 7163 2.4 % A Ala GCG 3690 1.23 % A Ala GCT 6678 2.24 % C Cys TGT 2272 0.76 % C Cys TGC 3517 1.18 % D Asp GAC 6895 2.31 % D Asp GAT 9153 3.07 % E Glu GAA 7752 2.6 % E Glu GAG 12785 4.29 % F Phe TTC 9844 3.3 % F Phe TTT 2176 0.73 % G Gly GGA 10977 3.68 % G Gly GGC 4067 1.36 % G Gly GGG 1372 0.46 % G Gly GGT 3343 1.12 % H His CAC 3941 1.32 % H His CAT 3422 1.14 % * stop TAA 30 0.01 % * stop TAG 16 0 % * stop TGA 13 0 % I Ile ATA 1657 0.55 % I Ile ATC 9096 3.05 % I Ile ATT 5103 1.71 % K Lys AAA 4766 1.6 % K Lys AAG 14927 5.01 % L Leu CTA 1835 0.61 % L Leu CTC 9241 3.1 % L Leu CTG 5045 1.69 % L Leu CTT 4608 1.54 % L Leu TTA 1193 0.4 % L Leu TTG 3139 1.05 % M Met ATG 7598 2.55 % N Asn AAC 5785 1.94 % N Asn AAT 5853 1.96 % P Pro CCA 2320 0.77 % P Pro CCC 5792 1.94 % P Pro CCG 2682 0.9 % P Pro CCT 4326 1.45 % Q Gln CAA 3772 1.26 % Q Gln CAG 6344 2.13 % R Arg AGA 5814 1.95 % R Arg CGA 3119 1.04 % R Arg AGG 1868 0.62 % R Arg CGC 3074 1.03 % R Arg CGG 1115 0.37 % R Arg CGT 4018 1.35 % S Ser AGC 2220 0.74 % S Ser TCA 3342 1.12 % S Ser TCC 4682 1.57 % S Ser AGT 2340 0.78 % S Ser TCG 4834 1.62 % S Ser TCT 5173 1.73 % T Thr ACA 2594 0.87 % T Thr ACC 4093 1.37 % T Thr ACG 3974 1.33 % T Thr ACT 5291 1.77 % V Val GTA 2248 0.75 % V Val GTC 6450 2.16 % V Val GTG 5791 1.94 % V Val GTT 4450 1.49 % W Typ TGG 3498 1.17 % Y Tyr TAC 5742 1.92 % Y Tyr TAT 3100 1.04 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).