Strongyloides stercoralis: 693 partial CDSs (693 contigs; 682 clusters; 111095 codons) AMINO ACID FREQUENCIES ====================== F Phe 4646 4.18 % S Ser 7399 6.66 % T Thr 5923 5.33 % N Asn 6195 5.57 % K Lys 9239 8.31 % * stop 0 0 % E Glu 7854 7.06 % Y Tyr 3999 3.59 % V Val 6751 6.07 % Q Gln 4166 3.74 % M Met 2571 2.31 % C Cys 2090 1.88 % L Leu 9105 8.19 % A Ala 6721 6.04 % W Typ 1137 1.02 % P Pro 4780 4.3 % H His 2316 2.08 % D Asp 6447 5.8 % I Ile 7469 6.72 % R Arg 5483 4.93 % G Gly 6804 6.12 % CODON USAGE FREQUENCIES ======================= F Phe TTT 3659 3.29 % F Phe TTC 987 0.88 % S Ser AGT 1752 1.57 % S Ser AGC 206 0.18 % S Ser TCG 106 0.09 % S Ser TCA 2639 2.37 % S Ser TCC 360 0.32 % S Ser TCT 2336 2.1 % T Thr ACA 2902 2.61 % T Thr ACC 500 0.45 % T Thr ACG 168 0.15 % T Thr ACT 2353 2.11 % N Asn AAC 950 0.85 % N Asn AAT 5245 4.72 % K Lys AAG 1837 1.65 % K Lys AAA 7402 6.66 % * stop TGA 0 0 % * stop TAA 0 0 % * stop TAG 0 0 % E Glu GAG 1516 1.36 % E Glu GAA 6338 5.7 % Y Tyr TAC 848 0.76 % Y Tyr TAT 3151 2.83 % V Val GTG 214 0.19 % V Val GTT 4168 3.75 % V Val GTA 1598 1.43 % V Val GTC 771 0.69 % Q Gln CAG 406 0.36 % Q Gln CAA 3760 3.38 % M Met ATG 2571 2.31 % C Cys TGT 1746 1.57 % C Cys TGC 344 0.3 % L Leu CTG 88 0.07 % L Leu CTC 374 0.33 % L Leu TTG 1060 0.95 % L Leu CTT 3299 2.96 % L Leu TTA 3874 3.48 % L Leu CTA 410 0.36 % A Ala GCC 651 0.58 % A Ala GCA 2013 1.81 % A Ala GCG 68 0.06 % A Ala GCT 3989 3.59 % W Typ TGG 1137 1.02 % P Pro CCG 83 0.07 % P Pro CCA 3297 2.96 % P Pro CCC 126 0.11 % P Pro CCT 1274 1.14 % H His CAC 397 0.35 % H His CAT 1919 1.72 % D Asp GAC 948 0.85 % D Asp GAT 5499 4.94 % I Ile ATC 791 0.71 % I Ile ATT 4727 4.25 % I Ile ATA 1951 1.75 % R Arg CGA 273 0.24 % R Arg AGA 2690 2.42 % R Arg CGC 207 0.18 % R Arg AGG 421 0.37 % R Arg CGT 1841 1.65 % R Arg CGG 51 0.04 % G Gly GGA 3518 3.16 % G Gly GGT 2729 2.45 % G Gly GGG 327 0.29 % G Gly GGC 230 0.2 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).