Trichinella spiralis: 2693 contigs; 290794 codons AMINO ACID FREQUENCIES ====================== A Ala 18017 6.19 % C Cys 7559 2.59 % D Asp 14599 5.02 % E Glu 18001 6.19 % F Phe 14907 5.12 % G Gly 14863 5.11 % H His 7245 2.49 % * stop 146 0.05 % I Ile 17746 6.1 % K Lys 19233 6.61 % L Leu 27491 9.45 % M Met 7625 2.62 % N Asn 14343 4.93 % P Pro 11909 4.09 % Q Gln 11420 3.92 % R Arg 16384 5.63 % S Ser 22175 7.62 % T Thr 14901 5.12 % V Val 18805 6.46 % W Typ 3486 1.19 % Y Tyr 9939 3.41 % CODON USAGE FREQUENCIES ======================= A Ala GCA 5717 1.96 % A Ala GCC 2955 1.01 % A Ala GCG 3318 1.14 % A Ala GCT 6027 2.07 % C Cys TGT 3913 1.34 % C Cys TGC 3646 1.25 % D Asp GAC 4843 1.66 % D Asp GAT 9756 3.35 % E Glu GAA 14229 4.89 % E Glu GAG 3772 1.29 % F Phe TTC 5117 1.75 % F Phe TTT 9790 3.36 % G Gly GGA 4621 1.58 % G Gly GGC 3650 1.25 % G Gly GGG 1349 0.46 % G Gly GGT 5243 1.8 % H His CAC 2828 0.97 % H His CAT 4417 1.51 % * stop TAA 71 0.02 % * stop TAG 23 0 % * stop TGA 52 0.01 % I Ile ATA 4436 1.52 % I Ile ATC 3822 1.31 % I Ile ATT 9488 3.26 % K Lys AAA 13352 4.59 % K Lys AAG 5881 2.02 % L Leu CTA 1589 0.54 % L Leu CTC 1890 0.64 % L Leu CTG 4385 1.5 % L Leu CTT 4751 1.63 % L Leu TTA 4767 1.63 % L Leu TTG 10109 3.47 % M Met ATG 7625 2.62 % N Asn AAC 5001 1.71 % N Asn AAT 9342 3.21 % P Pro CCA 4567 1.57 % P Pro CCC 1301 0.44 % P Pro CCG 2906 0.99 % P Pro CCT 3135 1.07 % Q Gln CAA 6839 2.35 % Q Gln CAG 4581 1.57 % R Arg AGA 3579 1.23 % R Arg CGA 3717 1.27 % R Arg AGG 1171 0.4 % R Arg CGC 2251 0.77 % R Arg CGG 1391 0.47 % R Arg CGT 4275 1.47 % S Ser AGC 3353 1.15 % S Ser TCA 4647 1.59 % S Ser TCC 2293 0.78 % S Ser AGT 4245 1.45 % S Ser TCG 3183 1.09 % S Ser TCT 4454 1.53 % T Thr ACA 4741 1.63 % T Thr ACC 2424 0.83 % T Thr ACG 2953 1.01 % T Thr ACT 4783 1.64 % V Val GTA 3639 1.25 % V Val GTC 3148 1.08 % V Val GTG 4955 1.7 % V Val GTT 7063 2.42 % W Typ TGG 3486 1.19 % Y Tyr TAC 3847 1.32 % Y Tyr TAT 6092 2.09 % # - number of times the codon is observed % - relative aa / codon usage value (usage of a given codon among its redundant set, i.e. the set of codons which code for this codon's amino acid).