Nematode Net

FUNCTIONAL CLASSIFICATIONS

A Note on AmiGO From BDGP:
With AmiGO, you can search for a GO term and view all gene products annotated to it, or search for a gene product and view all its associations. You can also browse the ontologies to view relationships between terms as well as the number of gene products annotated to a given term. AmiGO accesses the GO mySQL database; the browser and documentation are available from http://www.godatabase.org/dev/ -- for more information see: Gene Ontology Consortium.

last update: 7-26-07

Genomes	#Genes	AmiGO Data
Ancylostoma caninum_Annotation_EST (based on iprscan data release 13.1)	9113	GO
Brugia malayi_Annotation (based on iprscan data release 13.1)	11749	GO
EST contigs	#Contigs	AmiGO Data
Ancylostoma caninum (based on iprscan data release 13.1)	5484	GO
Ancylostoma ceylanicum (based on iprscan data release 13.1)	4953	GO
Ascaris suum (based on iprscan data release 13.1)	17989	GO
Brugia malayi (based on iprscan data release 13.1)	1609	GO
Dirofilaria immitis (based on iprscan data release 13.1)	2534	GO
Globodera pallida (based on iprscan data release 13.1)	2973	GO
Globodera rostochiensis (based on iprscan data release 13.1)	2530	GO
Haemonchus contortus (based on iprscan data release 13.1)	9842	GO
Heterodera glycines (based on iprscan data release 13.1)	2026	GO
Heterodera schachtii (based on iprscan data release 13.1)	1600	GO
Meloidogyne arenaria (based on iprscan data release 13.1)	3372	GO
Meloidogyne chitwoodi (based on iprscan data release 13.1)	5880	GO
Meloidogyne hapla (based on iprscan data release 13.1)	11193	GO
Meloidogyne incognita (based on iprscan data release 13.1)	9107	GO
Meloidogyne javanica (based on iprscan data release 13.1)	5172	GO
Meloidogyne paranaensis (based on iprscan data release 13.1)	2263	GO
Nippostrongylus brasiliensis (based on iprscan data release 13.1)	3949	GO
Ostertagia ostertagi (based on iprscan data release 13.1)	4831	GO
Parastrongyloides trichosuri (based on iprscan data release 13.1)	4934	GO
Pratylenchus penetrans (based on iprscan data release 13.1)	488	GO
Pristionchus pacificus (based on iprscan data release 13.1)	2654	GO
Radopholus similis (based on iprscan data release 13.1)	788	GO
Strongyloides ratti (based on iprscan data release 13.1)	5237	GO
Strongyloides stercoralis (based on iprscan data release 13.1)	3479	GO
Toxocara canis (based on iprscan data release 13.1)	2135	GO
Trichinella spiralis (based on iprscan data release 13.1)	5958	GO
Trichuris vulpis (based on iprscan data release 13.1)	1690	GO
Xiphinema index (based on iprscan data release 13.1)	5485	GO
Zeldia punctata (based on iprscan data release 13.1)	202	GO