Nematode Net

By the end of February 2008, the Parasitic Nematode Project conducted by the Genome Center (GC) at Washington University School of Medicine (St. Louis, Missouri, USA) has submitted ~530,000 ESTs from 40 nematode species and ~540,000 GSSs from 2 nematode species.

Check below on this page for the status of sequencing for each species.

Table 1: Progress of Nematode EST Sequencing at the Genome Sequencing Center, Washington Univ. (Updated 07-01-08)


Species	GSSs Submitted	Status	Clade	Funding
Ancylostoma caninum	94,429	completed	V	NHGRI
Ascaris suum	451,746	completed	III	NHGRI

TOTAL	546,175


Species	ESTs Submitted	Status	Clade	Funding
Ancylostoma caninum	79,287	completed	V	NIAID
Ancylostoma ceylanicum	10,590	completed	V	NIAID
Ancylostoma duodenale	-	-	V	NIAID
Ascaris suum	46,402	In progress	III	NIAID
Ascaris lumbricoides	-	-	III	NIAID
Brugia malayi	3,773	completed	III	NIAID
Caenorhabditis briggsae	2,424	completed	V	---
Caenorhabditis elegans	388	completed	V	---
Caenorhabditis PB2801	28,131	completed	V	NHGRI
Caenorhabditis remanei	20,289	completed	V	NHGRI
Caenorhabditis japonica	31,367	completed	V	NHGRI
Dirofilaria immitis	4,005	completed	III	NIAID
Ditylenchus africanus	4,847	completed	IVb	NIAID
Globodera pallida	2,546	completed	IVb	NSF
Globodera rostochiensis	9,742	completed	IVb	NSF
Heterodera glycines	20,109	completed	IVb	NIAID
Heterodera schachtii	2,804	completed	IVb	NSF
Heterorhabditis bacteriophora	42,088	In progress	V	NHGRI
Haemonchus contortus	14,014	completed	V	NIAID
Meloidogyne arenaria	5,018	completed	IVb	NSF/NIAID
Meloidogyne chitwoodi	12,218	completed	IVb	NSF
Meloidogyne hapla	24,454	completed	IVb	NSF
Meloidogyne incognita	19,000	completed	IVb	NSF/NIAID
Meloidogyne javanica	7,565	completed	IVb	NSF/NIAID
Meloidogyne paranaensis	3,710	completed	IVb	NSF
Nippostrongylus brasiliensis	13,452	completed	V	NIAID
Onchocerca flexuosa	2,124	completed	III	NIAID
Onchocerca volvulus	1,230	completed	III	---
Ostertagia ostertagi	6,558	completed	V	NIAID
Parastrongyloides trichosuri	7,963	completed	IVa	NIAID
Pratylenchus penetrans	1,928	completed	IVb	NSF
Pratylenchus vulnus	2,485	completed	IVb	NSF
Pristionchus pacificus	25,110	completed	V	Max Planck
Radopholus similis	7,360	completed	IVb	NSF
Strongyloides ratti	14,761	completed	IVa	NIAID/MRC
Strongyloides stercoralis	11,335	completed	IVa	NIAID
Toxocara canis	4,370	completed	III	NIAID
Trichuris muris	4,388	completed	I	NHGRI
Trichinella spiralis	25,049	completed	I	NIAID
Trichuris vulpis	3,063	completed	I	NIAID
Xiphinema index	8,424	completed	I	NSF
Zeldia punctata	391	completed	IVb	NIAID

TOTAL	534,762

Species Quick Links

Ancylostoma caninum	Ancylostoma ceylanicum	Ancylostoma duodenale	Ascaris lumbricoides	Ascaris suum	Brugia malayi
Caenorhabditis briggsae	Caenorhabditis elegans	Caenorhabditis japonica	Caenorhabditis PB2801	Caenorhabditis remanei	Dirofilaria immitis
Ditylenchus africanus	Globodera pallida	Globodera rostochiensis	Heterorhabditis bacteriophora	Haemonchus contortus	Heterodera glycines
Heterodera schachtii	Litomosoides sigmodontis	Meloidogyne arenaria	Meloidogyne chitwoodi	Meloidogyne hapla	Meloidogyne incognita
Meloidogyne javanica	Meloidogyne paranaensis	Necator americanus	Nippostrongylus brasiliensis	Onchocerca ochengi	Onchocerca flexuosa
Onchocerca volvulus	Ostertagia ostertagi	Parastrongyloides trichosuri	Pratylenchus penetrans	Pratylenchus vulnus	Pristionchus pacificus
Radopholus similis	Strongyloides ratti	Strongyloides stercoralis	Teladorsagia circumcincta	Toxocara canis	Trichinella spiralis
Trichuris muris	Trichuris trichiura	Trichuris vulpis	Wuchereria bancrofti	Xiphinema index	Zeldia punctata