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By the end of February 2008, the Parasitic Nematode Project conducted by The Genome Institute (TGI) at Washington University School of Medicine (St. Louis, Missouri, USA) has submitted ~530,000 ESTs from 40 nematode species and ~540,000 GSSs from 2 nematode species.

By September of 2011, an additional ~11.4 million reads of RNAseq (454) have been sequenced. The breakdown per organism is shown below.

As of October 2014, we've produced ~14 billion reads worth of Illumina RNAseq data. Counts per species shown below.


Species ESTs Submitted Status Clade Funding
Ancylostoma caninum 79,287 completed V NIAID
Ancylostoma ceylanicum 10,590 completed V NIAID
Ancylostoma duodenale - - V NIAID
Ascaris suum 46,402 completed III NIAID
Ascaris lumbricoides - - III NIAID
Brugia malayi 3,773 completed III NIAID
Caenorhabditis briggsae 2,424 completed V ---
Caenorhabditis elegans 388 completed V ---
Caenorhabditis PB2801 28,131 completed V NHGRI
Caenorhabditis remanei 20,289 completed V NHGRI
Caenorhabditis japonica 31,367 completed V NHGRI
Dirofilaria immitis 4,005 completed III NIAID
Ditylenchus africanus 4,847 completed IVb NIAID
Globodera pallida 2,546 completed IVb NSF
Globodera rostochiensis 9,742 completed IVb NSF
Heterodera glycines 20,109 completed IVb NIAID
Heterodera schachtii 2,804 completed IVb NSF
Heterorhabditis bacteriophora 42,088 completed V NHGRI
Haemonchus contortus 14,014 completed V NIAID
Meloidogyne arenaria 5,018 completed IVb NSF/NIAID
Meloidogyne chitwoodi 12,218 completed IVb NSF
Meloidogyne hapla 24,454 completed IVb NSF
Meloidogyne incognita 19,000 completed IVb NSF/NIAID
Meloidogyne javanica 7,565 completed IVb NSF/NIAID
Meloidogyne paranaensis 3,710 completed IVb NSF
Nippostrongylus brasiliensis 13,452 completed V NIAID
Onchocerca flexuosa 2,124 completed III NIAID
Onchocerca volvulus 1,230 completed III ---
Ostertagia ostertagi 6,558 completed V NIAID
Parastrongyloides trichosuri 7,963 completed IVa NIAID
Pratylenchus penetrans 1,928 completed IVb NSF
Pratylenchus vulnus 2,485 completed IVb NSF
Pristionchus pacificus 25,110 completed V Max Planck
Radopholus similis 7,360 completed IVb NSF
Strongyloides ratti 14,761 completed IVa NIAID/MRC
Strongyloides stercoralis 11,335 completed IVa NIAID
Toxocara canis 4,370 completed III NIAID
Trichuris muris 4,388 completed I NHGRI
Trichinella spiralis 25,049 completed I NIAID
Trichuris vulpis 3,063 completed I NIAID
Xiphinema index 8,424 completed I NSF
Zeldia punctata 391 completed IVb NIAID





TOTAL 534,762





Species GSSs Submitted Status Clade Funding
Ancylostoma caninum 94,429 completed V NHGRI
Ascaris suum 451,630 completed III NHGRI





TOTAL 546,059





Species RNAseq (454) Status Clade Funding
Ancylostoma caninum 1,483,002 in progress V NHGRI/NIAID
Cooperia oncophora 1,319,363 in progress V NHGRI
Dictyocaulus viviparus 1,330,579 in progress V NHGRI
Heterorhabditis bacteriophora 580,165 in progress V NHGRI
Necator americanus 507,397 in progress V NHGRI
Oesophagostomum dentatum 1,268,664 in progress V NHGRI
Ostertagia ostertagi 1,596,628 in progress V NHGRI/NIAID
Teladorsagia circumcincta 885,913 in progress V NHGRI
Trichostrongylus colubriformis 2,399,700 in progress V NHGRI





TOTAL 11,371,411





Species RNAseq (Illumina) Status Clade Funding
Ancylostoma caninum 751,160,824 in progress V NHGRI
Ancylostoma ceylanicum 3,061,438,754 in progress V NHGRI
Ascaris suum 3,410,173,373 in progress III NHGRI
Caenorhabditis elegans 444,013,308 in progress V NHGRI
Cooperia oncophora 175,360,526 in progress V NHGRI
Dictyocaulus viviparus 1,860,382,922 in progress V NHGRI
Haemonchus contortus 545,574,100 in progress V NHGRI
Heterodera glycines 3,586,156 in progress IVb NHGRI
Heterodera schachtii 657,000 in progress IVb NHGRI
Meloidogyne incognita 831,256 in progress IVb NHGRI
Necator americanus 151,581,339 in progress V NHGRI
Oesophagostomum dentatum 1,309,838,656 in progress V NHGRI
Onchocerca volvulus 501,663,780 in progress III NHGRI
Ostertagia ostertagi 133,876,024 in progress V NHGRI
Teladorsagia circumcincta 308,214,706 in progress V NHGRI
Trichuris suis 1,387,978,334 in progress I NHGRI
TOTAL 14,046,331,058





 
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