NemaGene : nemabrowser

 News
[Mar.12.2013]   New Postdoc position available!

[Feb.11.2013]   Ascaris suum microarray data now mirrored locally!

[Nov.1.2012]   NemaGene Gene Tables now available

[Nov.1.2012]   CDS for Bursaphelenchus xylophilus made available as a blastable database in NemaBLAST





NemaBrowse
NemaBrowse is a collection of nematode genomes annotated with gene predictions and displayed using the GBrowse interface. Gene names are those assigned by the various gene calling mechanisms employed during gene prediction and may be subject to change. Minimal annotation is made available in the gene list using either final gene product information, or information derived from WU-BLAST mappings to NR using a post-alignment cutoff of 35 bits + 55% identity.



Annotated genomes:
(last updated 08-15-11)
Project Species information Gene prediction software GBrowse annotations
Trichuris suis T.suis TaxBrowser at NCBI MAKER Gene list
Trichinella spiralis T.spiralis TaxBrowser at NCBI A modified version of the Ensembl Analysis Pipeline, eannot, fgenesh, and the SNAP denovo gene finder Gene list
       


 
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