NemaGene : cluster data ftp

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Clustering Data Text Files

Files with the name SUMMARY in the title have the contig consensus sequences. Files with cluster_groups in their title contain the cluster that each contig belongs to. Files with the name HISTORY in the title have the EST membership of each contig.

Last update: 03/03/2008

Species History Consensus fasta sequences Cluster group Protein translations
Ancylostoma caninum CLUSTER_HISTORY CLUSTER_SUMMARY.030219 Cluster_groups Translations
Ancylostoma ceylanicum CLUSTER_HISTORY CLUSTER_SUMMARY.030325 Cluster_groups Translations
Ascaris suum CLUSTER_HISTORY CLUSTER_SUMMARY.020516 Cluster_groups Translations
Brugia malayi CLUSTER_HISTORY CLUSTER_SUMMARY.030818 Cluster_groups Translations
Caenorhabditis remanei CLUSTER_HISTORY CLUSTER_SUMMARY.060510 Cluster_groups Translations
Dirofilaria immitis CLUSTER_HISTORY CLUSTER_SUMMARY.030709 Cluster_groups Translations
Ditylenchus africanus CLUSTER_HISTORY CLUSTER_SUMMARY.071107 Cluster_groups Translations
Globodera pallida CLUSTER_HISTORY CLUSTER_SUMMARY.060810 Cluster_groups Translations
Globodera rostochiensis CLUSTER_HISTORY CLUSTER_SUMMARY.071219 Cluster_groups Translations
Heterodera glycines CLUSTER_HISTORY CLUSTER_SUMMARY.071019 Cluster_groups Translations
Heterodera schachtii CLUSTER_HISTORY CLUSTER_SUMMARY.051230 Cluster_groups Translations
Haemonchus contortus CLUSTER_HISTORY CLUSTER_SUMMARY.0410702 Cluster_groups Translations
Meloidogyne arenaria CLUSTER_HISTORY CLUSTER_SUMMARY.051212 Cluster_groups Translations
Meloidogyne chitwoodi CLUSTER_HISTORY CLUSTER_SUMMARY.050421 Cluster_groups Translations
Meloidogyne hapla CLUSTER_HISTORY CLUSTER_SUMMARY.050523 Cluster_groups Translations
Meloidogyne incognita CLUSTER_HISTORY CLUSTER_SUMMARY.050621 Cluster_groups Translations
Meloidogyne javanica CLUSTER_HISTORY. CLUSTER_SUMMARY.060103 Cluster_groups Translations
Meloidogyne paranaensis CLUSTER_HISTORY CLUSTER_SUMMARY.051214 Cluster_groups Translations
Nippostrongylus brasiliensis CLUSTER_HISTORY CLUSTER_SUMMARY.080415 Cluster_groups Translations
Onchocerca flexuosa CLUSTER_HISTORY CLUSTER_SUMMARY.071212 Cluster_groups Translations
Ostertagia ostertagi CLUSTER_HISTORY CLUSTER_SUMMARY.060103 Cluster_groups Translations
Parastrongyloides trichosuri CLUSTER_HISTORY CLUSTER_SUMMARY.060103 Cluster_groups Translations
Pratylenchus penetrans CLUSTER_HISTORY CLUSTER_SUMMARY.030402 Cluster_groups Translations
Pristionchus pacificus CLUSTER_HISTORY CLUSTER_SUMMARY.010706 Cluster_groups Translations
Radopholus similis CLUSTER_HISTORY CLUSTER_SUMMARY.071114 Cluster_groups Translations
Strongyloides ratti CLUSTER_HISTORY CLUSTER_SUMMARY.031211 Cluster_groups Translations
Strongyloides stercoralis CLUSTER_HISTORY CLUSTER_SUMMARY.011025 Cluster_groups Translations
Toxocara canis CLUSTER_HISTORY CLUSTER_SUMMARY.060103 Cluster_groups Translations
Trichinella spiralis CLUSTER_HISTORY CLUSTER_SUMMARY.021105 Cluster_groups Translations
Trichuris muris CLUSTER_HISTORY CLUSTER_SUMMARY.071220 Cluster_groups Translations
Xiphinema index CLUSTER_HISTORY CLUSTER_SUMMARY.050325 Cluster_groups Translations
Zeldia punctata CLUSTER_HISTORY CLUSTER_SUMMARY.010618 Cluster_groups Translations

 
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