Nematode.net v3.0

Home
Sequencing Numbers Publications Staff Collaborators & Grants Phyla Library Details Data Download Data Archive Accession IDs Software Clone Requests FAQ
HelmCoP
HelmCoP Home Search for Gene Search for Ortholog HelmCoP BLAST HelmCoP FAQ
NemaGene
NemaBLAST NemaGene Cluster Search NemaGene Gene Tables NemaSNP Codon Usage Tables NemaBrowse cDNA Assemblies Cluster Data Download
Function & Expression
GO Associations NemaPath KEGG Associations Intestinal Transcriptome Nematode Protein Families (NemFam) Gene Expression Data
Links
NCBI WormBase C.elegans Server NEMBASE4 Sanger Institute (Helminth data) Washington University The Genome Institute

Species table : Trichostrongylus colubriformis

[Mar.12.2013] New Postdoc position available!

[Feb.11.2013] Ascaris suum microarray data now mirrored locally!

[Nov.1.2012] NemaGene Gene Tables now available

[Nov.1.2012] CDS for Bursaphelenchus xylophilus made available as a blastable database in NemaBLAST

Community Nematode.net user forum

Education Introduction to Nematodes

FAQ Nematode.net FAQ NemaGene FAQ HelmCoP FAQ

Free-living Nematodes Caenorhabditis brenneri Caenorhabditis briggsae Caenorhabditis elegans Caenorhabditis japonica Caenorhabditis PB2801 Caenorhabditis remanei Pristionchus pacificus Zeldia punctata

Human Parasitic Nematodes Ancylostoma ceylanicum Ancylostoma duodenale Ascaris lumbricoides Brugia malayi Necator americanus Onchocerca volvulus Strongyloides stercoralis Trichinella spiralis Trichuris trichiura Wuchereria bancrofti

Plant Parasitic Nematodes Ditylenchus africanus Globodera pallida Globodera rostochiensis Heterodera glycines Heterodera schachtii Meloidogyne arenaria Meloidogyne artellia Meloidogyne chitwoodi Meloidogyne exigua Meloidogyne hapla Meloidogyne incognita Meloidogyne javanica Meloidogyne paranaensis Pratylenchus penetrans Pratylenchus vulnus Rodopholus similis Xiphinema index

Entomopathogenic Nematodes Heterorhabditis bacteriophora Steinernema carpocapsae

Species	Trichostrongylus colubriformis
Clade:	Clade V
Disease:	Causes black scours in lambs, occasionally leading to death. More commonly it causes loss of production.
NemaGene information:	NemaGene Cluster Search Sanger-based cluster count :0 454-based cluster count :20214
NemaBLAST database:	BLAST vs. transcript contigs & genes
Codon usage table:	Codon Usage table
KEGG Associations:	KEGG Associations(cDNA isotigs)
Assembly data availability:	cDNA assembly available
NCBI BioProject id:	PRJNA74537

	Nematode.net v3.0 Copyright Statement
	User support forum Nematode.net User Support
Follow @nematodenet	Webmaster nematode@genome.wustl.edu

Washington University School of Medicine